Transcript: ENSDART00000128889.3 zbtb40-201

Description

zinc finger and BTB domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-1704]

Location

About this transcript

This transcript has 17 exons, is annotated with 70 domains and features, is associated with 756 variant alleles and maps to 68 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000128889.3	zbtb40-201	3554	1060aa	ENSDARP00000105010.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F660	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000179025.2	zbtb40-202	3246	1060aa	ENSDARP00000144208.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F660	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 17, Coding exons: 16, Transcript length: 3,554 bps, Translation length: 1,060 residues

Version

ENSDART00000128889.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]