Transcript: ENSDART00000122117.3 SACS-201

Description

sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]

Location

About this transcript

This transcript has 9 exons, is annotated with 28 domains and features, is associated with 917 variant alleles and maps to 262 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000122117.3	SACS-201	18019	4578aa	ENSDARP00000106937.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FCI9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000177158.2	SACS-203	14311	4578aa	ENSDARP00000143904.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FCI9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189045.1	SACS-202	14113	4512aa	ENSDARP00000148597.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 18,019 bps, Translation length: 4,578 residues

Version

ENSDART00000122117.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]