Transcript: ENSDART00000127579.3 scpp1-201

Description

secretory calcium-binding phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-090424-1]

Location

About this transcript

This transcript has 9 exons, is annotated with 21 domains and features, is associated with 3 variant alleles and maps to 72 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000127579.3	scpp1-201	984	258aa	ENSDARP00000106027.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000191887.1	scpp1-203	3071	251aa	ENSDARP00000148126.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000193155.1	scpp1-204	2992	251aa	ENSDARP00000146063.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000189077.1	scpp1-202	2891	258aa	ENSDARP00000149139.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 984 bps, Translation length: 258 residues

Version

ENSDART00000127579.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.