Transcript: ENSDART00000170678.2 USP48-202

Description

ubiquitin specific peptidase 48 [Source:ZFIN;Acc:ZDB-GENE-050522-197]

Location

About this transcript

This transcript has 13 exons, is annotated with 7 domains and features, is associated with 945 variant alleles and maps to 45 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000123591.3	USP48-203	6559	1092aa	ENSDARP00000111894.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000165203.2	USP48-201	4226	1047aa	ENSDARP00000130019.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IB93	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170678.2	USP48-202	1867	515aa	ENSDARP00000131033.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,867 bps, Translation length: 515 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000170678.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.