Transcript: ENSDART00000127318.3 frmpd1b-201

Description

FERM and PDZ domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-140328-1]

Location

About this transcript

This transcript has 17 exons, is annotated with 47 domains and features, is associated with 1833 variant alleles and maps to 133 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000127318.3	frmpd1b-201	9085	1656aa	ENSDARP00000105629.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FEY8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157725.2	frmpd1b-202	773	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 17, Coding exons: 15, Transcript length: 9,085 bps, Translation length: 1,656 residues

Version

ENSDART00000127318.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]