Transcript: ENSDART00000145368.3 mtcl3a-202

Description

MTCL family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]

Location

About this transcript

This transcript has 7 exons, is annotated with 24 domains and features, is associated with 863 variant alleles and maps to 52 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000145368.3	mtcl3a-202	3871	923aa	ENSDARP00000118055.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QC39	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000189704.1	mtcl3a-203	3405	813aa	ENSDARP00000154214.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QJ68	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 3,871 bps, Translation length: 923 residues

Version

ENSDART00000145368.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.