Transcript: ENSDART00000150641.2 si:ch211-22k7.9-204

Description

si:ch211-22k7.9 [Source:ZFIN;Acc:ZDB-GENE-070424-160]

Location

About this transcript

This transcript has 2 exons, is associated with 41 variant alleles and maps to 71 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000133901.4	si:ch211-22k7.9-202	4041	1232aa	ENSDARP00000115194.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000179734.1	si:ch211-22k7.9-205	5814	243aa	ENSDARP00000148192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000121804.3	si:ch211-22k7.9-201	2425	628aa	ENSDARP00000106041.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QC83	-
ENSDART00000150371.3	si:ch211-22k7.9-203	1404	355aa	ENSDARP00000125274.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000150641.2	si:ch211-22k7.9-204	709	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 709 bps,

Version

ENSDART00000150641.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.