Transcript: ENSDART00000129030.3 nxf1a-201

Description

nuclear RNA export factor 1a [Source:ZFIN;Acc:ZDB-GENE-060825-299]

Location

About this transcript

This transcript has 20 exons, is annotated with 22 domains and features, is associated with 828 variant alleles and maps to 179 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000129030.3	nxf1a-201	2049	610aa	ENSDARP00000109457.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000160584.2	nxf1a-202	738	149aa	ENSDARP00000136109.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 2,049 bps, Translation length: 610 residues

Version

ENSDART00000129030.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.