Transcript: ENSDART00000111542.5 shroom4-201

Description

shroom family member 4 [Source:ZFIN;Acc:ZDB-GENE-041111-246]

Location

About this transcript

This transcript has 10 exons, is annotated with 57 domains and features, is associated with 1858 variant alleles and maps to 376 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000170100.3	shroom4-202	541	99aa	ENSDARP00000136569.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000111542.5	shroom4-201	6362	1634aa	ENSDARP00000103889.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q6C1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 6,362 bps, Translation length: 1,634 residues

Version

ENSDART00000111542.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]