Transcript: ENSDART00000170303.2 si:ch211-112f3.4-201

Description

si:ch211-112f3.4 [Source:ZFIN;Acc:ZDB-GENE-141219-9]

Location

About this transcript

This transcript has 8 exons, is annotated with 13 domains and features, is associated with 437 variant alleles and maps to 69 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000170303.2	si:ch211-112f3.4-201	2888	583aa	ENSDARP00000137482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IRQ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172211.2	si:ch211-112f3.4-202	281	93aa	ENSDARP00000134937.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,888 bps, Translation length: 583 residues

Version

ENSDART00000170303.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported partial [Definitions]