Transcript: ENSDART00000193210.1 si:ch211-184m13.4-203

Description

si:ch211-184m13.4 [Source:ZFIN;Acc:ZDB-GENE-070912-160]

Location

Chromosome 9: 31,134,907-31,136,004 reverse strand.

About this transcript

This transcript has 1 exon, is annotated with 41 domains and features, is associated with 162 variant alleles and maps to 72 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000079522.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000128896.3	si:ch211-184m13.4-202	1102	343aa	ENSDARP00000111258.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DK24	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000193210.1	si:ch211-184m13.4-203	1098	332aa	ENSDARP00000145897.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000113027.4	si:ch211-184m13.4-201	939	312aa	ENSDARP00000099383.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 1,098 bps, Translation length: 332 residues

Version

ENSDART00000193210.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000193210.1 si:ch211-184m13.4-203

Summary

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Transcript: ENSDART00000193210.1 si:ch211-184m13.4-203

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