Transcript: ENSDART00000115117.5 brd4-202

Description

bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]

Location

About this transcript

This transcript has 20 exons, is annotated with 75 domains and features, is associated with 452 variant alleles and maps to 297 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000115117.5	brd4-202	6023	1444aa	ENSDARP00000101616.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R5H6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000114343.4	brd4-201	5235	1519aa	ENSDARP00000104162.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 20, Coding exons: 18, Transcript length: 6,023 bps, Translation length: 1,444 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: F1R5H6

Version

ENSDART00000115117.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.