Transcript: ENSDART00000133116.2 LRRTM4-201

Description

si:dkey-28o19.1 [Source:ZFIN;Acc:ZDB-GENE-091118-30]

Location

Chromosome 10: 18,462,450-18,463,934 reverse strand.

About this transcript

This transcript has 1 exon, is annotated with 28 domains and features, is associated with 122 variant alleles and maps to 56 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000078839.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000183302.1	LRRTM4-202	2747	635aa	ENSDARP00000146705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q9L0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000179936.1	LRRTM4-204	2385	635aa	ENSDARP00000149807.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q9L0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193799.1	LRRTM4-206	2179	631aa	ENSDARP00000150474.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000193198.1	LRRTM4-205	2145	555aa	ENSDARP00000154781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000113422.4	LRRTM4-203	1607	520aa	ENSDARP00000097998.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000133116.2	LRRTM4-201	1485	495aa	ENSDARP00000112859.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 1,485 bps, Translation length: 495 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000133116.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000133116.2 LRRTM4-201

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Transcript: ENSDART00000133116.2 LRRTM4-201

Summary

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