Transcript: ENSDART00000143682.3 lgals3a-203

Description

lectin, galactoside binding soluble 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7667]

Location

About this transcript

This transcript has 4 exons, is associated with 10 variant alleles and maps to 112 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000113204.4	lgals3a-201	999	332aa	ENSDARP00000100661.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137335.2	lgals3a-202	1283	251aa	ENSDARP00000114535.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000146671.2	lgals3a-204	1170	202aa	ENSDARP00000116153.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000143682.3	lgals3a-203	869	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 869 bps,

Version

ENSDART00000143682.3

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.