Transcript: ENSDART00000138035.2 OLFM2-202

Description

olfactomedin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2882]

Location

About this transcript

This transcript has 2 exons, is associated with 88 variant alleles and maps to 49 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109894.4	OLFM2-201	1928	483aa	ENSDARP00000104138.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R5K6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000178486.2	OLFM2-203	3043	454aa	ENSDARP00000143588.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286Y8W4	-
ENSDART00000154542.3	OLFM2-204	2831	444aa	ENSDARP00000129003.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000138035.2	OLFM2-202	275	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 275 bps,

Version

ENSDART00000138035.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.