Transcript: ENSDART00000149129.2 ARHGEF10-201

Description

Rho guanine nucleotide exchange factor (GEF) 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6210]

Location

Chromosome 17: 25,230,011-25,240,436 forward strand.

About this transcript

This transcript has 7 exons, is associated with 861 variant alleles and maps to 20 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000077788.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000148775.3	ARHGEF10-202	4004	1239aa	ENSDARP00000124695.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000110451.4	ARHGEF10-204	3720	1239aa	ENSDARP00000100913.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149129.2	ARHGEF10-201	780	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000150084.3	ARHGEF10-203	296	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 780 bps,

Version

ENSDART00000149129.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000149129.2 ARHGEF10-201

Summary

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Transcript: ENSDART00000149129.2 ARHGEF10-201

Summary

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