Transcript: ENSDART00000110470.4 TSPEAR-201

Description

thrombospondin-type laminin G domain and EAR repeats a [Source:ZFIN;Acc:ZDB-GENE-120215-12]

Location

About this transcript

This transcript has 12 exons, is annotated with 24 domains and features, is associated with 488 variant alleles and maps to 101 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000110470.4	TSPEAR-201	2031	676aa	ENSDARP00000098431.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EY40	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193660.1	TSPEAR-204	2013	670aa	ENSDARP00000148732.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000161749.2	TSPEAR-202	2010	669aa	ENSDARP00000132069.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000193976.1	TSPEAR-203	1596	531aa	ENSDARP00000155961.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,031 bps, Translation length: 676 residues

Version

ENSDART00000110470.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.