Transcript: ENSDART00000155090.3 tanc1a-202

Description

tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1a [Source:ZFIN;Acc:ZDB-GENE-130530-819]

Location

About this transcript

This transcript has 23 exons, is annotated with 62 domains and features, is associated with 2024 variant alleles and maps to 82 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109344.4	tanc1a-201	5393	1781aa	ENSDARP00000097594.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F6L6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000155090.3	tanc1a-202	5681	1628aa	ENSDARP00000128684.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 23, Coding exons: 22, Transcript length: 5,681 bps, Translation length: 1,628 residues

Version

ENSDART00000155090.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.