Transcript: ENSDART00000171379.2 SCG5-201

Description

secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]

Location

Chromosome 19: 47,526,213-47,527,093 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 9 domains and features, is associated with 39 variant alleles and maps to 50 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000077045.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000114886.3	SCG5-202	995	219aa	ENSDARP00000101682.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PC28	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186636.1	SCG5-204	1173	219aa	ENSDARP00000144917.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PC28	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171140.2	SCG5-203	980	219aa	ENSDARP00000134850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PC28	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171379.2	SCG5-201	718	120aa	ENSDARP00000133009.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 718 bps, Translation length: 120 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000171379.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000171379.2 SCG5-201

Summary

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Transcript: ENSDART00000171379.2 SCG5-201

Summary

About Us

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