Transcript: ENSDART00000148595.3 CAPN10-202

Description

calpain 10 [Source:ZFIN;Acc:ZDB-GENE-110411-137]

Location

About this transcript

This transcript has 13 exons, is annotated with 26 domains and features, is associated with 414 variant alleles and maps to 132 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109890.4	CAPN10-203	1977	658aa	ENSDARP00000097691.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000148595.3	CAPN10-202	2684	649aa	ENSDARP00000123910.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8N7UW33	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150002.2	CAPN10-201	421	26aa	ENSDARP00000125074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 2,684 bps, Translation length: 649 residues

Version

ENSDART00000148595.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]