Transcript: ENSDART00000064292.5 zgc:172075-201

Description

zgc:172075 [Source:ZFIN;Acc:ZDB-GENE-080215-3]

Location

About this transcript

This transcript has 3 exons, is annotated with 16 domains and features, is associated with 446 variant alleles and maps to 162 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000064292.5	zgc:172075-201	2529	543aa	ENSDARP00000064291.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QVS3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000114242.4	zgc:172075-202	4842	543aa	ENSDARP00000099865.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QVS3	-
ENSDART00000114434.4	zgc:172075-203	2403	531aa	ENSDARP00000099114.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 2,529 bps, Translation length: 543 residues

Version

ENSDART00000064292.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported partial [Definitions]