Transcript: ENSDART00000160971.2 JAKMIP1-205

Description

janus kinase and microtubule interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-110208-7]

Location

Chromosome 14: 17,230,283-17,305,849 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 30 domains and features, is associated with 1909 variant alleles and maps to 89 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000076090.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000191747.1	JAKMIP1-206	3288	824aa	ENSDARP00000151399.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FCQ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000160971.2	JAKMIP1-205	3258	824aa	ENSDARP00000130168.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FCQ1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000168853.2	JAKMIP1-204	3081	824aa	ENSDARP00000136718.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FCQ1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171064.2	JAKMIP1-201	1032	194aa	ENSDARP00000131805.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000172317.2	JAKMIP1-203	913	135aa	ENSDARP00000136719.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000173944.2	JAKMIP1-202	141	46aa	ENSDARP00000142737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 21, Coding exons: 20, Transcript length: 3,258 bps, Translation length: 824 residues

Version

ENSDART00000160971.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

Transcript: ENSDART00000160971.2 JAKMIP1-205

Summary

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Transcript: ENSDART00000160971.2 JAKMIP1-205

Summary

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