Transcript: ENSDART00000147615.3 ZYX-201

Description

zyxin [Source:ZFIN;Acc:ZDB-GENE-070928-18]

Location

About this transcript

This transcript has 5 exons, is annotated with 16 domains and features, is associated with 441 variant alleles and maps to 57 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143056.3	ZYX-202	2114	608aa	ENSDARP00000113371.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QC03	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144392.2	ZYX-203	1976	608aa	ENSDARP00000118075.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QC03	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147615.3	ZYX-201	776	208aa	ENSDARP00000120426.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 776 bps, Translation length: 208 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000147615.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.