Transcript: ENSDART00000111074.5 si:ch211-120k19.1-201

Description

si:ch211-120k19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-282]

Location

About this transcript

This transcript has 6 exons, is annotated with 9 domains and features, is associated with 160 variant alleles and maps to 87 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000111074.5	si:ch211-120k19.1-201	1920	231aa	ENSDARP00000102071.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F2C3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182819.1	si:ch211-120k19.1-202	1181	231aa	ENSDARP00000147666.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F2C3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 1,920 bps, Translation length: 231 residues

Version

ENSDART00000111074.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]