Transcript: ENSDART00000111903.5 si:ch73-335m24.2-201

Description

si:ch73-335m24.2 [Source:ZFIN;Acc:ZDB-GENE-100922-203]

Location

About this transcript

This transcript has 7 exons, is annotated with 19 domains and features, is associated with 596 variant alleles and maps to 67 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000111903.5	si:ch73-335m24.2-201	1369	380aa	ENSDARP00000135027.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1RFD0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000162840.2	si:ch73-335m24.2-203	2368	407aa	ENSDARP00000136065.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M2BKL3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137427.3	si:ch73-335m24.2-202	370	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,369 bps, Translation length: 380 residues

Version

ENSDART00000111903.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported partial [Definitions]