Transcript: ENSDART00000111605.4 STAC-203

Description

SH3 and cysteine rich domain [Source:ZFIN;Acc:ZDB-GENE-131121-459]

Location

Chromosome 17: 24,752,922-24,787,564 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 22 domains and features, is associated with 1639 variant alleles and maps to 73 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000074004.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000111605.4	STAC-203	1140	379aa	ENSDARP00000100359.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000154623.3	STAC-201	1607	375aa	ENSDARP00000129479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000185059.1	STAC-202	1086	361aa	ENSDARP00000148819.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,140 bps, Translation length: 379 residues

Version

ENSDART00000111605.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000111605.4 STAC-203

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Transcript: ENSDART00000111605.4 STAC-203

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