Transcript: ENSDART00000154410.2 COLGALT1-201

Description

collagen beta(1-O)galactosyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-070720-6]

Location

About this transcript

This transcript has 12 exons, is annotated with 17 domains and features, is associated with 1297 variant alleles and maps to 78 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000154410.2	COLGALT1-201	2422	618aa	ENSDARP00000127889.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WCE6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,422 bps, Translation length: 618 residues

Version

ENSDART00000154410.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.