Transcript: ENSDART00000152460.2 NLRX1-202

Description

NLR family member X1 [Source:ZFIN;Acc:ZDB-GENE-071119-3]

Location

Chromosome 15: 23,469,122-23,475,051 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 10 domains and features, is associated with 3 variant alleles and maps to 35 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000073724.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000152706.3	NLRX1-201	3971	1005aa	ENSDARP00000126680.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FDW7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185523.1	NLRX1-203	3018	1005aa	ENSDARP00000154296.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FDW7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185823.1	NLRX1-204	2973	990aa	ENSDARP00000156516.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000152460.2	NLRX1-202	712	237aa	ENSDARP00000126611.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 712 bps, Translation length: 237 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000152460.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000152460.2 NLRX1-202

Summary

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Transcript: ENSDART00000152460.2 NLRX1-202

Summary

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