Transcript: ENSDART00000102538.6 pitx3-201

Description

paired-like homeodomain 3 [Source:ZFIN;Acc:ZDB-GENE-041229-4]

Location

Chromosome 13: 7,556,312-7,573,670 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 18 domains and features, is associated with 383 variant alleles and maps to 166 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000070069.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000102538.6	pitx3-201	1865	293aa	ENSDARP00000093314.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GRZ8 Q6QU75	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180348.1	pitx3-203	2269	306aa	ENSDARP00000144770.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000190296.1	pitx3-204	921	293aa	ENSDARP00000146864.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GRZ8 Q6QU75	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000159443.2	pitx3-202	884	280aa	ENSDARP00000139963.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,865 bps, Translation length: 293 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6QU75

Version

ENSDART00000102538.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000102538.6 pitx3-201

Summary

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Transcript: ENSDART00000102538.6 pitx3-201

Summary

About Us

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