Transcript: ENSDART00000102501.5 ARFIP1-201

Description

ADP-ribosylation factor interacting protein 1 (arfaptin 1) [Source:ZFIN;Acc:ZDB-GENE-040426-2690]

Location

About this transcript

This transcript has 8 exons, is annotated with 10 domains and features, is associated with 687 variant alleles and maps to 197 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000102501.5	ARFIP1-201	1629	339aa	ENSDARP00000093278.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SYK6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141892.3	ARFIP1-202	1885	446aa	ENSDARP00000121937.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8M3	-
ENSDART00000134200.2	ARFIP1-203	949	269aa	ENSDARP00000116340.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000131628.2	ARFIP1-204	957	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,629 bps, Translation length: 339 residues

Version

ENSDART00000102501.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.