Transcript: ENSDART00000150004.2 si:ch211-198k9.6-203

Description

si:ch211-198k9.6 [Source:ZFIN;Acc:ZDB-GENE-090312-4]

Location

Chromosome 1: 29,178,222-29,179,934 forward strand.

About this transcript

This transcript has 5 exons, is associated with 56 variant alleles and maps to 1885 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000069804.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000114536.4	si:ch211-198k9.6-201	1036	173aa	ENSDARP00000098381.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGR2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186905.1	si:ch211-198k9.6-204	522	173aa	ENSDARP00000148600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGR2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149219.3	si:ch211-198k9.6-202	1397	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000150004.2	si:ch211-198k9.6-203	1174	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,174 bps,

Version

ENSDART00000150004.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000150004.2 si:ch211-198k9.6-203

Summary

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Transcript: ENSDART00000150004.2 si:ch211-198k9.6-203

Summary

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