Transcript: ENSDART00000101732.5 CAPN5-201

Description

calpain 5b [Source:ZFIN;Acc:ZDB-GENE-091116-29]

Location

About this transcript

This transcript has 12 exons, is annotated with 30 domains and features, is associated with 1196 variant alleles and maps to 73 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000101732.5	CAPN5-201	1943	642aa	ENSDARP00000092508.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F7F1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,943 bps, Translation length: 642 residues

Version

ENSDART00000101732.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.