Transcript: ENSDART00000142957.3 col17a1a-201

Description

collagen, type XVII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090313-107]

Location

About this transcript

This transcript has 52 exons, is annotated with 59 domains and features, is associated with 710 variant alleles and maps to 176 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000142957.3	col17a1a-201	4745	1408aa	ENSDARP00000122777.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A4S4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 52, Coding exons: 51, Transcript length: 4,745 bps, Translation length: 1,408 residues

Version

ENSDART00000142957.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.