Transcript: ENSDART00000079757.6 VPS4B-201

Description

vacuolar protein sorting 4 homolog B [Source:ZFIN;Acc:ZDB-GENE-040426-1235]

Location

About this transcript

This transcript has 12 exons, is annotated with 21 domains and features, is associated with 159 variant alleles and maps to 94 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000127693.4	VPS4B-202	2648	437aa	ENSDARP00000111799.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5WWM0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000079757.6	VPS4B-201	2564	437aa	ENSDARP00000074209.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5WWM0	-
ENSDART00000168258.2	VPS4B-203	1640	507aa	ENSDARP00000136647.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IPK7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,564 bps, Translation length: 437 residues

Version

ENSDART00000079757.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.