Transcript: ENSDART00000100234.6 COL2A1-201

Description

collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]

Location

About this transcript

This transcript has 54 exons, is annotated with 78 domains and features, is associated with 829 variant alleles and maps to 224 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000100234.6	COL2A1-201	5937	1491aa	ENSDARP00000091007.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2LDA1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000091307.6	COL2A1-202	5723	1421aa	ENSDARP00000085740.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DLK0	-

Summary

Statistics

Exons: 54, Coding exons: 54, Transcript length: 5,937 bps, Translation length: 1,491 residues

Version

ENSDART00000100234.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.