Transcript: ENSDART00000141549.2 HSPA8-202

Description

heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]

Gene Synonyms

hsc70, wu:fb01g06, wu:fi48b06

Location

Chromosome 10: 29,852,677-29,853,710 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 8 domains and features, is associated with 126 variant alleles and maps to 202 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000068992.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000099994.5	HSPA8-203	2453	649aa	ENSDARP00000090766.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NYR4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180242.1	HSPA8-205	6791	654aa	ENSDARP00000150450.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000168898.2	HSPA8-204	1953	649aa	ENSDARP00000141099.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NYR4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141549.2	HSPA8-202	678	127aa	ENSDARP00000121031.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000132212.2	HSPA8-201	675	188aa	ENSDARP00000119867.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 678 bps, Translation length: 127 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000141549.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000141549.2 HSPA8-202

Summary

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Transcript: ENSDART00000141549.2 HSPA8-202

Summary

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