Transcript: ENSDART00000147441.2 lim2.1-202

Description

lens intrinsic membrane protein 2.1 [Source:ZFIN;Acc:ZDB-GENE-050522-398]

Gene Synonyms

mp19-1, zgc:110024

Location

About this transcript

This transcript has 4 exons, is annotated with 30 domains and features, is associated with 406 variant alleles and maps to 121 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000078800.5	lim2.1-201	761	173aa	ENSDARP00000073261.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q503X7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147441.2	lim2.1-202	542	173aa	ENSDARP00000119337.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q503X7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 542 bps, Translation length: 173 residues

Version

ENSDART00000147441.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.