Transcript: ENSDART00000133960.2 xaf1-202

Description

XIAP associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-060929-840]

Location

About this transcript

This transcript has 5 exons, is associated with 270 variant alleles and maps to 87 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000099885.5	xaf1-201	1410	270aa	ENSDARP00000090658.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QWG9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138449.2	xaf1-203	726	149aa	ENSDARP00000116352.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000133960.2	xaf1-202	1208	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,208 bps,

Version

ENSDART00000133960.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.