Transcript: ENSDART00000173965.2 OTOG-201

Description

otogelin [Source:ZFIN;Acc:ZDB-GENE-120228-1]

Location

About this transcript

This transcript has 56 exons, is annotated with 80 domains and features, is associated with 8 variant alleles and maps to 496 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000173965.2	OTOG-201	10367	3120aa	ENSDARP00000142662.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173538.2	OTOG-202	764	255aa	ENSDARP00000142739.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 56, Coding exons: 56, Transcript length: 10,367 bps, Translation length: 3,120 residues

Version

ENSDART00000173965.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]