Transcript: ENSDART00000142985.2 si:rp71-68n21.9-201

Description

si:rp71-68n21.9 [Source:ZFIN;Acc:ZDB-GENE-081105-100]

Location

Chromosome 9: 21,165,068-21,166,910 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 3 domains and features, is associated with 177 variant alleles and maps to 104 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000067751.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000177286.2	si:rp71-68n21.9-203	3319	686aa	ENSDARP00000144154.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QHV0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145933.3	si:rp71-68n21.9-202	2212	686aa	ENSDARP00000118816.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QHV0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142985.2	si:rp71-68n21.9-201	338	79aa	ENSDARP00000112832.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 338 bps, Translation length: 79 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000142985.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000142985.2 si:rp71-68n21.9-201

Summary

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Transcript: ENSDART00000142985.2 si:rp71-68n21.9-201

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