Transcript: ENSDART00000093000.7 PLEKHB1-201

Description

pleckstrin homology domain containing B1 [Source:ZFIN;Acc:ZDB-GENE-030131-7664]

Location

About this transcript

This transcript has 6 exons, is annotated with 12 domains and features, is associated with 70 variant alleles and maps to 139 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000157179.2	PLEKHB1-202	873	188aa	ENSDARP00000128812.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WF09	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000093000.7	PLEKHB1-201	2469	183aa	ENSDARP00000087432.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6PA84	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,469 bps, Translation length: 183 residues

Version

ENSDART00000093000.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.