Transcript: ENSDART00000148261.2 cenpe-206

Description

centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]

Location

Chromosome 1: 292,545-296,057 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 220 variant alleles and maps to 143 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000063385.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000111806.5	cenpe-202	8469	2690aa	ENSDARP00000099552.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F2U4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000092584.5	cenpe-201	1481	317aa	ENSDARP00000087016.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000148261.2	cenpe-206	942	199aa	ENSDARP00000122023.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000133431.2	cenpe-203	514	171aa	ENSDARP00000121876.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000148172.2	cenpe-205	509	170aa	ENSDARP00000116809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000139438.2	cenpe-204	534	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 942 bps, Translation length: 199 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000148261.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000148261.2 cenpe-206

Summary

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Transcript: ENSDART00000148261.2 cenpe-206

Summary

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