Transcript: ENSDART00000091620.6 atp8a1-201

Description

ATPase phospholipid transporting 8A1 [Source:ZFIN;Acc:ZDB-GENE-060929-36]

Location

Chromosome 14: 44,860,335-44,963,865 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 16 domains and features, is associated with 1421 variant alleles and maps to 122 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000063001.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000091625.6	atp8a1-202	1697	380aa	ENSDARP00000086058.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q08BV9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000091620.6	atp8a1-201	1769	347aa	ENSDARP00000086053.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000173043.2	atp8a1-203	272	17aa	ENSDARP00000142241.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,769 bps, Translation length: 347 residues

Version

ENSDART00000091620.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000091620.6 atp8a1-201

Summary

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Transcript: ENSDART00000091620.6 atp8a1-201

Summary

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