Transcript: ENSDART00000088459.4 HTR3B-203

Description

5-hydroxytryptamine (serotonin) receptor 3B [Source:ZFIN;Acc:ZDB-GENE-071012-4]

Location

Chromosome 21: 23,108,420-23,131,600 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 30 domains and features, is associated with 664 variant alleles and maps to 96 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000061749.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000192394.1	HTR3B-202	1239	412aa	ENSDARP00000146510.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000088459.4	HTR3B-203	1203	400aa	ENSDARP00000082892.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000134019.2	HTR3B-201	624	208aa	ENSDARP00000119900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,203 bps, Translation length: 400 residues

Version

ENSDART00000088459.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000088459.4 HTR3B-203

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Transcript: ENSDART00000088459.4 HTR3B-203

Summary

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