Transcript: ENSDART00000153988.3 CACHD1-201

Description

cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]

Location

About this transcript

This transcript has 26 exons, is annotated with 17 domains and features, is associated with 1954 variant alleles and maps to 177 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000087964.7	CACHD1-202	3873	1290aa	ENSDARP00000082397.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F5Q0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153988.3	CACHD1-201	4693	1211aa	ENSDARP00000129386.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 26, Coding exons: 26, Transcript length: 4,693 bps, Translation length: 1,211 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000153988.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.