Transcript: ENSDART00000134196.2 nrxn2a-202

Description

neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]

Location

Chromosome 21: 28,145,980-28,234,944 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 1630 variant alleles and maps to 172 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000061454.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000132583.3	nrxn2a-201	4333	648aa	ENSDARP00000118463.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7ZCV1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000141629.3	nrxn2a-203	6930	1670aa	ENSDARP00000119607.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000164458.2	nrxn2a-204	5013	1670aa	ENSDARP00000140509.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134196.2	nrxn2a-202	576	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 576 bps,

Version

ENSDART00000134196.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000134196.2 nrxn2a-202

Summary

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Transcript: ENSDART00000134196.2 nrxn2a-202

Summary

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