Transcript: ENSDART00000146662.3 trim35-33-201

Description

tripartite motif containing 35-33 [Source:ZFIN;Acc:ZDB-GENE-081031-1]

Location

About this transcript

This transcript has 6 exons, is annotated with 32 domains and features, is associated with 16 variant alleles and maps to 211 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000186398.1	trim35-33-202	4549	459aa	ENSDARP00000153058.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000146662.3	trim35-33-201	1723	459aa	ENSDARP00000119250.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R7D2	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,723 bps, Translation length: 459 residues

Version

ENSDART00000146662.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.