Transcript: ENSDART00000085645.6 usp16-201

Description

ubiquitin specific peptidase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-4153]

Location

About this transcript

This transcript has 17 exons, is annotated with 29 domains and features, is associated with 581 variant alleles and maps to 324 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000085645.6	usp16-201	3660	815aa	ENSDARP00000080080.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9QC36 A8HAL1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133835.2	usp16-202	746	107aa	ENSDARP00000123938.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000134075.2	usp16-203	488	113aa	ENSDARP00000120379.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 17, Coding exons: 16, Transcript length: 3,660 bps, Translation length: 815 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A8HAL1

Version

ENSDART00000085645.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.