Transcript: ENSDART00000085612.6 PCDH7-202

Description

protocadherin 7b [Source:ZFIN;Acc:ZDB-GENE-081104-299]

Location

About this transcript

This transcript has 2 exons, is annotated with 69 domains and features, is associated with 2076 variant alleles and maps to 203 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000161436.2	PCDH7-203	3729	1242aa	ENSDARP00000139416.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UKU4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147785.3	PCDH7-201	4683	1043aa	ENSDARP00000128689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WEN8	-
ENSDART00000085612.6	PCDH7-202	3304	1101aa	ENSDARP00000080047.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 3,304 bps, Translation length: 1,101 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000085612.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.