Transcript: ENSDART00000133170.3 ARHGEF28-201

Description

Rho guanine nucleotide exchange factor (GEF) 28a [Source:ZFIN;Acc:ZDB-GENE-060531-28]

Location

About this transcript

This transcript has 34 exons, is annotated with 45 domains and features, is associated with 2549 variant alleles and maps to 257 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000133170.3	ARHGEF28-201	6200	1753aa	ENSDARP00000116715.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6P6M2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000085086.5	ARHGEF28-202	6091	981aa	ENSDARP00000079521.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000180245.1	ARHGEF28-203	4803	1600aa	ENSDARP00000145121.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 34, Coding exons: 33, Transcript length: 6,200 bps, Translation length: 1,753 residues

Version

ENSDART00000133170.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.